Dashboard

Tip

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How can I view accessions after submitting metadata?

Click to view answer

Hint

GenBank accession numbers follow the format GCA_XXXXXXXXX. They are automatically assigned by ENA and can be viewed on the National Centre for Biotechnology Information (NCBI) website using the link: https://www.ncbi.nlm.nih.gov/datasets/genome/?bioproject=<project-id> where <project-id> is the project ID or study ID associated with the profile used to submit the files in COPO.

Option 1: View accessions in the data table

Scroll to any column that ends with accession as depicted in the image below to view the accessions.

Note

The table row is highlighted in red in the image below because the files associated with the record are either still being processed or have encountered issues during processing.

Accessions column in the data table

Accessions column in the data table

Option 2: Accessions page

  • Click the accessions-icon button.

  • The accessions page will be displayed.

Option 3: Accessions dashboard

Navigate to the Accessions dashboard to view accessions


Can submissions be analysed?

Yes, the following are ways to analyse metadata submissions:

  1. Tree of Life dashboard * Alternatively, click the tol-dashboard-button button.

  2. Tree of Life inspection page * Alternatively, click the tol-inspect-button button.

  3. Tree of Life inspection by Genome Acquisition Lab page * Alternatively, click the tol-inspect-by-gal-button button.

  4. Statistics page